BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011B09SP1|AL426163
(749 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1804 1438 0.0
>3x_Contig1804
Length = 51183
Score = 1438 bits (723), Expect = 0.0
Identities = 744/751 (99%), Gaps = 2/751 (0%)
Strand = Plus / Plus
Query: 1 caaagatctcttcaaaaaatcttgtttgttgctagtcgatgaagcacaaaatgctaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33327 caaagatctcttcaaaaaatcttgtttgttgctagtcgatgaagcacaaaatgctaaata 33386
Query: 61 aaaacttaatcagctaaggattcaacgccaatatttgagagctatcaatcaatagctcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33387 aaaacttaatcagctaaggattcaacgccaatatttgagagctatcaatcaatagctcgt 33446
Query: 121 agaaccgaacaaagaaattgcctatagcttttgtaagcttttagaaaacgaatggtattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33447 agaaccgaacaaagaaattgcctatagcttttgtaagcttttagaaaacgaatggtattc 33506
Query: 181 tacagttatctgtaactgaattcacttcttgtaaactcataatacttcaacaattagcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33507 tacagttatctgtaactgaattcacttcttgtaaactcataatacttcaacaattagcag 33566
Query: 241 agcttctttcaattgggcgtttgttttcattctcgaatttaatcttgtttttattattgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33567 agcttctttcaattgggcgtttgttttcattctcgaatttaatcttgtttttattattgt 33626
Query: 301 tttcatgtttttctcaaatgcactttctgcatttgcggas-gcttt-cacaaagagaaaa 358
||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 33627 tttcatgtttttctcaaatgcactttctgcatttgcggagcgcttttcacaaagagaaaa 33686
Query: 359 ctatatagataaatgatacaattgcatttagcagacatacatatacacctataamaagta 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 33687 ctatatagataaatgatacaattgcatttagcagacatacatatacacctataaaaagta 33746
Query: 419 ggaaattggacggcaaaaacaaagtgtgacatctggcgtctgtcgtttcgaaacagtatt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33747 ggaaattggacggcaaaaacaaagtgtgacatctggcgtctgtcgtttcgaaacagtatt 33806
Query: 479 acttttcttctgacttcatgccacaatgtgtaaagccttaagaaaaccgaaaaamaaaac 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 33807 acttttcttctgacttcatgccacaatgtgtaaagccttaagaaaaccgaaaaaaaaaac 33866
Query: 539 ataaacggtataaaaagtatgavaactgatgttagattcctcgcacgttgtttgctgcaa 598
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 33867 ataaacggtataaaaagtatgaaaactgatgttagattcctcgcacgttgtttgctgcaa 33926
Query: 599 agaaagatcgataactgatgctatcaagaaaagatgcgctgtagtacgacagtcatataa 658
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 33927 agaaagatcgataactgatgctatcaagaaaagatgcgctgtagtacgacagtaatataa 33986
Query: 659 ttgggattctcgacaatatttctactgcatttacattggtgtagtacttctatgcgtaga 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33987 ttgggattctcgacaatatttctactgcatttacattggtgtagtacttctatgcgtaga 34046
Query: 719 aaaacttgaggattcaatgaactccgtcatg 749
|||||||||||||||||||||||||||||||
Sbjct: 34047 aaaacttgaggattcaatgaactccgtcatg 34077
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6348
Number of Sequences: 1807
Number of extensions: 6348
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 749
length of database: 10,358,551
effective HSP length: 16
effective length of query: 733
effective length of database: 10,329,639
effective search space: 7571625387
effective search space used: 7571625387
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)